Parallel RF Transmission: RF Shimming GUI

Parallel RF Transmission: RF Shimming GUI

Cem M Deniz

Parallel transmission experiments require knowledge of the B1+ distributions of individual coil transmit elements in order to tailor the RF excitation as desired. In addition to B1+ distributions, B0 maps and, if needed, power correlation matrices must be measured / calibrated before designing parallel transmission RF pulses. Even after scanner-related-measurements are acquired, RF pulse design requires inputs such as the desired excitation profile, the choice of RF pulse design method, the excitation k-space trajectory and so on. Since parallel transmit systems are still in the development stage, the workflow of obtaining the abovementioned inputs and designing parallel transmission RF pulses is not yet supported with intuitive graphical user interfaces (GUIs) of the sort used in clinical MRI scans. The lack of application specific GUIs for parallel transmit systems results in inefficiencies in the MRI scan workflow, e.g. longer experiments and operator errors. In order to increase the efficiency and accuracy of parallel transmit experiments, we developed and used custom-designed GUIs in the Matlab programming environment.

The GUIs provided here can be used not only for parallel transmit experiments but also for transmit coil design (e.g. using electromagnetic simulation results as inputs to test the suitability of prospective coil designs) and for educational purposes (e.g. for practice in RF pulse design).

RF Shimming GUI

RF shimming GUI (RFShimGUI) was developed for and used in the maximum efficiency RF shimming study which was published here. The download includes Matlab executable files for 64bit Windows.

Brief details of the implementation and the workflow of the RFShimGUI was extracted from Cem M. Deniz's PhD thesis and can be found here.

Example dataset as an input to RFShimGUI:

  • 4-channel in vivo hip B1+ maps used in the manuscript can be found here and the measured Φ-matrix with 20V calibration voltage.
  • 8-channel in vivo brain flip angle maps from 7T scanner can be found here.

Note: You need the Matlab Compiler Runtime (MCR) version 8.5 in order to run executable files. If you don't have it installed please download and install it from Matlab website using this link

Please let me know if you had any problems installing GUIs or find any bugs of the software (


PLEASE NOTE: The software available on this page is provided free of charge and comes without any warranty. CAI²R and the NYU School of Medicine do not take any liability for problems or damage of any kind resulting from the use of the files provided. Operation of the software is solely at the user's own risk. The software developments provided are not medical products and must not be used for making diagnostic decisions.

The software is provided for non-commercial, academic use only. Usage or distribution of the software for commercial purpose is prohibited. All rights belong to the author (Cem M Deniz) and the NYU School of Medicine. If you use the software for academic work, please give credit to the author in publications and cite the related publications.

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06/23/2017 - 10:49
06/23/2017 - 10:42

Philanthropic Support

We gratefully acknowledge generous support for radiology research at NYU Langone Medical Center from:
• The Big George Foundation
• Raymond and Beverly Sackler
• Bernard and Irene Schwartz

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