Matthew Muckley

Matthew J. Muckley, PhD
Post-Doctoral Fellow
Function: 
Collaborator
Affiliation: 
Center for Biomedical Imaging
Phone: 
(212) 263 4813
Fax: 
(212) 263 7541
Address: 
650 First Avenue, 2nd Floor, New York, NY 10016
Educational Details: 
  • PhD, Biomedical Engineering, University of Michigan, 2016
  • MSE, Electrical Engineering: Systems, University of Michigan, 2014
  • MS, Biomedical Engineering, University of Michigan, 2013
  • BS, Biomedical Engineering, Purdue University, 2011
Research Interest: 
  • X-Ray CT Imaging
  • Dynamic MR Imaging
  • Optimization Algorithms
  • Functional MR Imaging
Selected Publications: 

Google Scholar Profile

Journal Publications

  1. M. A. Cauble, M. J. Muckley, M. Fang, J. A. Fessler, K. Welch, E. D. Rothman, B. G. Orr, L. T. Duong, and M. M. B. Holl, “Estrogen depletion and drug treatment alter the microstructure of type I collagen in bone,” Bone Reports, vol. 5, pp. 243–51, Dec. 2016.
  2. M. J. Muckley, D. C. Noll, and J. A. Fessler, “Fast parallel MR image reconstruction via B1-based, adaptive restart, iterative soft thresholding algorithms (BARISTA),” IEEE Trans. Med. Imag., vol. 34, pp. 578–588, Feb. 2015.
  3. Z. Zhong, M. J. Muckley, S. Agcaoglu, M. Grisham, H. Zhao, M. Orth, M. Lilburn, D. Karcher, and O. Akkus, “The morphological, material-level, and ash properties of turkey femurs from three different genetic strains during production,” Poultry Sci., vol. 91, pp. 2736–2746, Nov. 2012.
  4. Z. Xu, X. Sun, J. Liu, Q. Song, M. J. Muckley, O. Akkus, and Y. L. Kim, “Spectroscopic visualization of nanoscale deformation in bone: interaction of light with partially disordered nanostructure,” J. Biomed. Optics, vol. 15, pp. 060503–060503, Dec. 2010.

Conference Papers

  1. B. Chen, M. J. Muckley, A. Sodickson, T. O’Donnell, F. Knoll, D. Sodickson, and R. Otazo, “Evaluation of SparseCT on patient data using realistic undersampling models,” in SPIE Med. Im. 2018, 2018. To appear.
  2. M. J. Muckley, B. Chen, T. Vahle, F. Knoll, A. Sodickson, D. K. Sodickson, and R. Otazo, “Regularizer performance for SparseCT image reconstruction with practical subsampling,” in Proc. Intl. Mtg. on Fully 3D Image Recon. in Rad. and Nuc. Med, 2017.
  3. B. Chen, M. J. Muckley, T. O’Donnell, A. Sodickson, T. Flohr, K. Stierstorfer, B. Schmidt, F. Knoll, A. Primak, D. Faul, D. Sodickson, and R. Otazo, “Realistic undersampling model for compressed sensing using a multi-slit collimator,” in Proc. Intl. Mtg. on Fully 3D Image Recon. in Rad. and Nuc. Med, 2017.
  4. M. J. Muckley and J. A. Fessler, “Fast MR image reconstruction with orthogonal wavelet regularization via shift-variant shrinkage,” in Proc. IEEE Int. Conf. on Image Processing, pp. 3651–3655, 2014.
  5. M. J. Muckley, S. Agcaoglu, Z. Zhong, H. Zhao, M. Grisham, D. Karcher, M. Orth, M. Lilburn, and O. Akkus, “The effect of selective breeding for body weight on geometric properties in turkey femurs,” in ASME 2011 Summer Bioeng. Conf., pp. 901–902, 2011.
  6. Z. Zhong, S. Agcaoglu, M. J. Muckley, H. Zhao, D. Karcher, M. Orth, M. Lilburn, and O. Akkus, “Changes in turkey femora mechanical properties resulting from selective breeding for body weight,” in ASME 2011 Summer Bioeng. Conf., pp. 897–898, 2011.

Conference Abstracts

  1. M. J. Muckley, L. Feng, H. Chandarana, D. K. Sodickson, and R. Otazo, “Respiratory motion-field reconstruction using low-rank plus sparse (L+S) approach for dynamic MRI of the lungs,” in Proc. Int. Soc. Magn. Res. Med., 2017, poster presentation.
  2. R. Ramb, M. Zenge, L. Feng, M. J. Muckley, C. Forman, L. Axel, D. K. Sodickson, and R. Otazo, “Low-rank plus sparse tensor reconstruction for high-dimensional cardiac MRI,” in Proc. Int. Soc. Magn. Res. Med., 2017, oral presentation.
  3. M. J. Muckley, D. C. Noll, and J. A. Fessler, “Fast, iterative subsampled spiral reconstruction via circulant majorizers,” in Proc. Int. Soc. Magn. Res. Med., 2016, oral presentation.
  4. D. C. Noll, M. J. Muckley, and A. Chu, “Novel approaches to image acquisition in functional MRI,” in Exp. Nucl. Magn. Res. Conf., 2016, oral presentation.
  5. M. J. Muckley, D. C. Noll, and J. A. Fessler, “Majorizer design for non-Cartesian MRI with sparsity-promoting regularization,” in ISMRM Workshop on Data Sampling & Image Reconstruction, 2016, poster presentation.
  6. M. J. Muckley, S. J. Peltier, J. A. Fessler, and D. C. Noll, “Improving fMRI scans using low rank modeling,” in UM Grad. Symp., 2015, poster presentation.
  7. M. J. Muckley, S. J. Peltier, J. A. Fessler, and D. C. Noll, “Physiological noise removal using partially-separable models,” in UM FMRI Symp., 2015, oral presentation.
  8. M. J. Muckley, D. C. Noll, and J. A. Fessler, “Momentum optimization for iterative shrinkage algorithms in parallel MRI with sparsity-promoting regularization,” in Proc. Int. Soc. Magn. Res. Med., p. 3413, 2015, poster presentation.
  9. M. J. Muckley, D. C. Noll, and J. A. Fessler, “BARISTA: A fast algorithm for MR image reconstruction with sparsity-promoting regularization,” in UM Grad. Symp., 2014, poster presentation.
  10. M. J. Muckley, A. Gilbert, J. A. Fessler, and D. C. Noll, “Imaging fleeting thoughts,” in UM M-Cubed Symp., 2014, poster presentation.
  11. M. J. Muckley, D. C. Noll, and J. A. Fessler, “Accelerating SENSE-type MR image reconstruction algorithms with incremental gradients,” in Proc. Int. Soc. Magn. Res. Med., p. 4400, 2014, poster presentation.
  12. M. J. Muckley, A. C. Gilbert, J. A. Fessler, and D. C. Noll, “Imaging fleeting thoughts,” in UM M-Cubed Symp., 2013, poster presentation.
  13. M. J. Muckley, S. J. Peltier, J. A. Fessler, and D. C. Noll, “Physiological noise removal using model-based reconstruction,” in UM FMRI Symp., 2013, oral presentation.
  14. M. J. Muckley, S. J. Peltier, D. C. Noll, and J. A. Fessler, “Model-based reconstruction for physiological noise correction in functional MRI,” in Proc. Int. Soc. Magn. Res. Med., p. 2623, 2013, poster presentation.
  15. M. J. Muckley, S. J. Peltier, J. A. Fessler, and D. C. Noll, “Group sparsity reconstruction for physiological noise correction in functional MRI,” in ISMRM Workshop on Data Sampling & Image Reconstruction, 2013, oral presentation.
  16. M. J. Muckley, J. A. Fessler, and D. C. Noll, “Reducing physiological noise in functional MRI by model-based reconstruction,” in UM Grad. Symp., 2012, poster presentation.

Sponsors

Latest Updates

12/29/2017 - 18:49
12/04/2017 - 18:10

Philanthropic Support

We gratefully acknowledge generous support for radiology research at NYU Langone Medical Center from:
 
• The Big George Foundation
• Raymond and Beverly Sackler
• Bernard and Irene Schwartz

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